April 15th 0915
mpiexec -np 2 -host localhost,node001 /common/clcbfxcell/blastall_cell_mpi -c cell_sw -v 1 -a 16 -b 1 -p blastx -m 8 -i /Volumes/bigfishRAID/Users/safs/Dropbox/Cluster/tmp/trout_lamprey_all.fa -d /common/clcbfxcell/databases/swissprot.fasta > /Volumes/bigfishRAID/Users/safs/Dropbox/Cluster/tmp/trout_lamprey_all_SP.txt
quit
restarted 10:30
mpiexec -np 2 -host localhost,node004 /common/clcbfxcell/blastall_cell_mpi -c cell_sw -v 1 -a 10 -b 1 -p blastx -m 8 -i /Volumes/bigfishRAID/Users/safs/Dropbox/Cluster/tmp/trout_lamprey_all.fa -d /common/clcbfxcell/databases/swissprot.fasta > /Volumes/bigfishRAID/Users/safs/Dropbox/Cluster/tmp/trout_lamprey_all_SP.txt
Finished by ~ Midnight
ALSO
trying on JGI GALAXY
blastx on NCBI
still running next AM
ALSO
INQUIRY
SP
DONE: 1400
join with Swiss prot title
ALSO
CLC SP Local Blast, one core
quit
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Query
trout_lamprey_all.fa
10232 sequences
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sample description